Transcript: ENSDART00000110499.4 atxn7-201

Description

ataxin 7 [Source:ZFIN;Acc:ZDB-GENE-110621-1]

Location

About this transcript

This transcript has 14 exons, is annotated with 36 domains and features, is associated with 2191 variant alleles and maps to 101 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110499.4	atxn7-201	8377	866aa	ENSDARP00000097837.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F640	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165989.2	atxn7-203	4842	866aa	ENSDARP00000131743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F640	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157847.2	atxn7-202	541	59aa	ENSDARP00000139234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IWD7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 12, Transcript length: 8,377 bps, Translation length: 866 residues

Version

ENSDART00000110499.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.