Transcript: ENSDART00000110059.5 vav3b-204

Description

vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]

Gene Synonyms

fk86g11, si:ch211-255p13.2, wu:fk86g11

Location

Chromosome 2: 15,993,389-16,159,491 reverse strand.

About this transcript

This transcript has 27 exons, is annotated with 52 domains and features, is associated with 2579 variant alleles and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000075962.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110059.5	vav3b-204	3388	826aa	ENSDARP00000099666.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6C8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000153480.3	vav3b-207	2469	822aa	ENSDARP00000128776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEX4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000142828.2	vav3b-205	721	241aa	ENSDARP00000122702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QT54	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000143414.2	vav3b-206	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 3,388 bps, Translation length: 826 residues

Version

ENSDART00000110059.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000110059.5 vav3b-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000110059.5 vav3b-204

Summary

About Us

Get help

Our sister sites

Follow us