Transcript: ENSDART00000109854.5 vegfab-201

Description

vascular endothelial growth factor Ab [Source:ZFIN;Acc:ZDB-GENE-030131-4605]

Gene Synonyms

fd42e02, si:dkey-14d8.3, wu:fd42e02

Location

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 523 variant alleles and maps to 57 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132431.3	vegfab-202	2198	251aa	ENSDARP00000120079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDN7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000136229.2	vegfab-203	2227	228aa	ENSDARP00000120175.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RHW5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000109854.5	vegfab-201	600	146aa	ENSDARP00000101780.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QTG5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 600 bps, Translation length: 146 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000109854.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.