Transcript: ENSDART00000103234.5 gmds-202

Description

GDP-mannose 4,6-dehydratase [Source:ZFIN;Acc:ZDB-GENE-050419-45]

Gene Synonyms

si:ch211-231n5.3, srn, towhead, twd, zgc:63772

Location

Chromosome 20: 26,709,011-26,822,550 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 10 domains and features, is associated with 1318 variant alleles and maps to 271 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000026629.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000046764.9	gmds-201	1693	370aa	ENSDARP00000046763.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000143267.2	gmds-203	2083	91aa	ENSDARP00000122672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T155	-
ENSDART00000103234.5	gmds-202	1712	377aa	ENSDARP00000094011.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPT3	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000146326.3	gmds-204	880	257aa	ENSDARP00000119997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVF6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,712 bps, Translation length: 377 residues

Version

ENSDART00000103234.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000103234.5 gmds-202

Summary

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Transcript: ENSDART00000103234.5 gmds-202

Summary

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