Transcript: ENSDART00000101051.4 slbp2-201

Description

stem-loop binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1722]

Gene Synonyms

zgc:158856

Location

About this transcript

This transcript has 8 exons, is annotated with 5 domains and features, is associated with 356 variant alleles and maps to 204 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101051.4	slbp2-201	1427	326aa	ENSDARP00000091825.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L2F4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142903.2	slbp2-203	625	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000137193.3	slbp2-202	776	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,427 bps, Translation length: 326 residues

Version

ENSDART00000101051.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.