Transcript: ENSDART00000098604.4 adam28-201

Description

ADAM metallopeptidase domain 28 [Source:ZFIN;Acc:ZDB-GENE-060929-532]

Gene Synonyms

si:ch211-133n22.1, zgc:153755

Location

Chromosome 5: 27,898,226-27,919,419 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 28 domains and features, is associated with 681 variant alleles and maps to 174 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000035514.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130936.3	adam28-202	3127	765aa	ENSDARP00000109705.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000098604.4	adam28-201	2396	762aa	ENSDARP00000089375.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KQJ0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000180251.1	adam28-204	1456	293aa	ENSDARP00000152657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QJX9	-
ENSDART00000137132.2	adam28-203	622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 2,396 bps, Translation length: 762 residues

Version

ENSDART00000098604.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000098604.4 adam28-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000098604.4 adam28-201

Summary

About Us

Get help

Our sister sites

Follow us