Transcript: ENSDART00000060466.7 si:dkey-241l7.6-201

Description

si:dkey-241l7.6 [Source:ZFIN;Acc:ZDB-GENE-041014-235]

Location

About this transcript

This transcript has 6 exons, is annotated with 19 domains and features, is associated with 11 variant alleles and maps to 154 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000060466.7	si:dkey-241l7.6-201	826	152aa	ENSDARP00000060465.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RG14	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152934.3	si:dkey-241l7.6-202	637	152aa	ENSDARP00000127254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RG14	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152979.2	si:dkey-241l7.6-203	180	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 826 bps, Translation length: 152 residues

Version

ENSDART00000060466.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.