Transcript: ENSDART00000058527.7 scfd2-201

Description

sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]

Gene Synonyms

si:dkey-161n17.2, zgc:110750

Location

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 2105 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131132.3	scfd2-202	2379	681aa	ENSDARP00000104899.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000058527.7	scfd2-201	1669	517aa	ENSDARP00000058526.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RHJ9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,669 bps, Translation length: 517 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000058527.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.