Transcript: ENSDART00000055502.6 ergic3-201

Description

ERGIC and golgi 3 [Source:NCBI gene;Acc:393990]

Gene Synonyms

sdbcag84, zgc:113959, zgc:55762

Location

About this transcript

This transcript has 13 exons, is annotated with 7 domains and features, is associated with 475 variant alleles and maps to 176 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055511.4	ergic3-202	1987	388aa	ENSDARP00000055510.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803I2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000055502.6	ergic3-201	2018	383aa	ENSDARP00000055501.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQE2 Q803I2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,018 bps, Translation length: 383 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q803I2

Version

ENSDART00000055502.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.