Transcript: ENSDART00000055325.7 psmb7-201

Description

proteasome 20S subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]

Gene Synonyms

beta2, unp311, zgc:110090

Location

Chromosome 21: 8,341,807-8,352,092 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 14 domains and features, is associated with 404 variant alleles and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037962.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129749.4	psmb7-202	1057	277aa	ENSDARP00000112303.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T002	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000055325.7	psmb7-201	1048	286aa	ENSDARP00000055324.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5N4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000133804.2	psmb7-204	861	211aa	ENSDARP00000118428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJ03	-
ENSDART00000141841.2	psmb7-205	792	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000132467.3	psmb7-203	787	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,048 bps, Translation length: 286 residues

Version

ENSDART00000055325.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000055325.7 psmb7-201

Summary

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Transcript: ENSDART00000055325.7 psmb7-201

Summary

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