Transcript: ENSDART00000054876.7 npm1b-201

Description

nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]

Gene Synonyms

npm4

Location

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 862 variant alleles and maps to 229 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054876.7	npm1b-201	3431	329aa	ENSDARP00000054875.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RD77	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000183859.1	npm1b-202	897	298aa	ENSDARP00000146562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PZA4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,431 bps, Translation length: 329 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000054876.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]