Transcript: ENSDART00000036605.8 prkra-201

Description

protein kinase, interferon-inducible double stranded RNA dependent activator [Source:NCBI gene;Acc:557370]

Gene Synonyms

im:7151758, zgc:162619

Location

About this transcript

This transcript has 8 exons, is annotated with 23 domains and features, is associated with 244 variant alleles and maps to 126 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000036605.8	prkra-201	1596	282aa	ENSDARP00000036697.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V3F8 B0V3F9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000140917.3	prkra-202	934	289aa	ENSDARP00000115290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8C8	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,596 bps, Translation length: 282 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: B0V3F8

Version

ENSDART00000036605.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.