Transcript: ENSDART00000036461.6 arhgap1-201

Description

Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]

Gene Synonyms

fk03b12, fk61c06, wu:cegs2891, wu:fk03b12, wu:fk61c06, zgc:110361

Location

About this transcript

This transcript has 13 exons, is annotated with 18 domains and features, is associated with 19 variant alleles and maps to 150 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000036461.6	arhgap1-201	3653	434aa	ENSDARP00000034827.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2J2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190827.1	arhgap1-203	1306	434aa	ENSDARP00000155305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2J2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131313.2	arhgap1-202	440	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 3,653 bps, Translation length: 434 residues

Version

ENSDART00000036461.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.