Transcript: ENSDART00000035827.6 brf1b-201

Description

BRF1 RNA polymerase III transcription initiation factor subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-6248]

Gene Synonyms

fi40c10, wu:fi40c10, zgc:63497

Location

About this transcript

This transcript has 19 exons, is annotated with 42 domains and features, is associated with 3020 variant alleles and maps to 158 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000035827.6	brf1b-201	3011	693aa	ENSDARP00000038308.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TZ89	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181195.1	brf1b-203	4234	693aa	ENSDARP00000149573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TZ89	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131907.2	brf1b-202	1058	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 3,011 bps, Translation length: 693 residues

Version

ENSDART00000035827.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.