Transcript: ENSDART00000035558.8 htatip2-201

Description

HIV-1 Tat interactive protein 2 [Source:ZFIN;Acc:ZDB-GENE-001219-1]

Gene Synonyms

fb15b04, tip30, wu:fb15b04

Location

Chromosome 7: 17,096,281-17,103,183 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 272 variant alleles and maps to 162 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000028386.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000035558.8	htatip2-201	1214	236aa	ENSDARP00000037018.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90Z77	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182880.1	htatip2-205	3216	236aa	ENSDARP00000145295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90Z77	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145357.3	htatip2-204	841	236aa	ENSDARP00000118348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90Z77	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132706.2	htatip2-202	582	137aa	ENSDARP00000115117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V0W3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140367.2	htatip2-203	2364	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,214 bps, Translation length: 236 residues

Version

ENSDART00000035558.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000035558.8 htatip2-201

Summary

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Transcript: ENSDART00000035558.8 htatip2-201

Summary

About Us

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