Transcript: ENSDART00000034968.9 ufd1l-201

Description

ubiquitin recognition factor in ER associated degradation 1 [Source:ZFIN;Acc:ZDB-GENE-040718-150]

Gene Synonyms

fc55f04, wu:fc55f04, zgc:92341

Location

About this transcript

This transcript has 12 exons, is annotated with 8 domains and features, is associated with 341 variant alleles and maps to 182 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034968.9	ufd1l-201	1308	308aa	ENSDARP00000035108.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DRD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132139.3	ufd1l-202	836	100aa	ENSDARP00000115288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S614	-
ENSDART00000137252.3	ufd1l-203	666	148aa	ENSDARP00000118492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S613	-
ENSDART00000143139.2	ufd1l-204	627	99aa	ENSDARP00000120767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIT9	-
ENSDART00000182894.1	ufd1l-205	303	100aa	ENSDARP00000148570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S614	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,308 bps, Translation length: 308 residues

Version

ENSDART00000034968.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.