Transcript: ENSDART00000011922.9 spopla-201

Description

speckle type BTB/POZ protein like a [Source:NCBI gene;Acc:541318]

Gene Synonyms

im:6961637, spopl, wu:fi71d08, zgc:101524, zgc:153365

Location

About this transcript

This transcript has 12 exons, is annotated with 17 domains and features, is associated with 639 variant alleles and maps to 148 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000011922.9	spopla-201	2565	392aa	ENSDARP00000026361.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BL35	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162818.2	spopla-202	1479	392aa	ENSDARP00000134710.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIR0 Q5BL35	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 10, Transcript length: 2,565 bps, Translation length: 392 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5BL35

Version

ENSDART00000011922.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.