Transcript: ENSDART00000162850.3 irx3a-201

Description

iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]

Gene Synonyms

hm:zehn0543, id:ibd3380, iro3, iro3-s1, iro3-s2, irx3, wu:fk88a03, zehn0543, zgc:109805, ziro3

Location

Chromosome 7: 36,041,509-36,044,827 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 19 domains and features, is associated with 82 variant alleles and maps to 161 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000101076.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162850.3	irx3a-201	1848	454aa	ENSDARP00000139882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90Z68	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000179004.2	irx3a-203	4893	450aa	ENSDARP00000143874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y9M4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000168658.3	irx3a-202	2628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Transcript: ENSDART00000162850.3 irx3a-201

Protein summary

Protein domains for ENSDARP00000139882.1

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Transcript: ENSDART00000162850.3 irx3a-201

Protein summary

Protein domains for ENSDARP00000139882.1

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