Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: ENSDART00000162827.2 si:dkey-92j12.5-202

.

Description

si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]

Location

Chromosome 1: 23,161,369-23,239,849 forward strand.

About this transcript

This transcript has 41 exons, is annotated with 87 domains and features, is associated with 2325 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094677.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162827.2	si:dkey-92j12.5-202	5772	1923aa	ENSDARP00000131526.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000188428.1	si:dkey-92j12.5-203	6071	1860aa	ENSDARP00000151048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RR49	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000147857.2	si:dkey-92j12.5-201	1043	270aa	ENSDARP00000119812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDB9	-

.

Protein summary

.

Protein domains for ENSDARP00000131526.2

.