Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: hoxa9a ENSDARG00000105013

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Description

homeobox A9a [Source:NCBI gene;Acc:58047]

Gene Synonyms

fd07f09, hoxx9, wu:fd07f09, z-10, zgc:110505

Location

Chromosome 19: 19,747,430-19,752,145 forward strand.

GRCz11:CM002903.2

About this gene

This gene has 2 transcripts (splice variants), 31 orthologues and 53 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168041.2	hoxa9a-202	1752	250aa	ENSDARP00000140324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GSB0 Q9PWL6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166129.2	hoxa9a-201	926	250aa	ENSDARP00000139889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GSB0 Q9PWL6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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