Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:dkey-33b17.3 ENSDARG00000104730

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Description

si:dkey-33b17.3 [Source:ZFIN;Acc:ZDB-GENE-030616-171]

Gene Synonyms

MHC class II, beta chain, si:busm1-160c18.3, si:dz160c18.3, zgc:158775

Location

Chromosome 8: 36,142,734-36,146,191 forward strand.

GRCz11:CM002892.2

About this gene

This gene has 2 transcripts (splice variants), 238 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159361.2	si:dkey-33b17.3-201	1044	277aa	ENSDARP00000137499.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IRA8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161194.2	si:dkey-33b17.3-202	1019	130aa	ENSDARP00000139928.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QNN2	-

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Summary

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