Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: si:ch211-246m6.5 ENSDARG00000103750

.

Description

si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]

Location

Chromosome 22: 14,178,813-14,272,699 reverse strand.

GRCz11:CM002906.2

About this gene

This gene has 5 transcripts (splice variants), 128 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000190121.1	si:ch211-246m6.5-206	5233	1384aa	ENSDARP00000148759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RMM6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000033332.8	si:ch211-246m6.5-202	1827	609aa	ENSDARP00000033391.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5X7	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000168264.2	si:ch211-246m6.5-205	414	138aa	ENSDARP00000137007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ILS2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000167088.2	si:ch211-246m6.5-204	316	106aa	ENSDARP00000140705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IY39	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000160605.2	si:ch211-246m6.5-203	372	85aa	ENSDARP00000137681.1	Nonsense mediated decay	A0A0R4IP64	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

.

Summary

.

.