Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LSM2 ENSDARG00000103066

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Description

si:ch73-14h10.2 [Source:ZFIN;Acc:ZDB-GENE-141222-67]

Gene Synonyms

wu:fe48h10, zgc:101795

Location

Chromosome 6: 28,205,296-28,211,513 forward strand.

GRCz11:CM002890.2

About this gene

This gene has 6 transcripts (splice variants), 198 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000190509.1	LSM2-206	4736	95aa	ENSDARP00000156037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RKP8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000171377.2	LSM2-203	812	76aa	ENSDARP00000130821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IA70	-
ENSDART00000166988.2	LSM2-202	547	70aa	ENSDARP00000131633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IES0	-
ENSDART00000167389.2	LSM2-204	487	70aa	ENSDARP00000131699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IES0	-
ENSDART00000171216.2	LSM2-205	472	34aa	ENSDARP00000140740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IWH4	-
ENSDART00000164466.2	LSM2-201	348	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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