Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pcdh1g11 ENSDARG00000101665

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Description

protocadherin 1 gamma 11 [Source:NCBI gene;Acc:553999]

Gene Synonyms

pcdh1g18, pcdh1g5, pcdh1g9

Location

Chromosome 10: 21,708,463-21,820,133 forward strand.

GRCz11:CM002894.2

About this gene

This gene has 2 transcripts (splice variants), 9 orthologues and 64 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000188827.1	pcdh1g11-202	4409	952aa	ENSDARP00000152911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QKI6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160925.2	pcdh1g11-201	4365	888aa	ENSDARP00000131275.1	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	-	-

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Summary

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