Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: ep400 ENSDARG00000100965

.

Description

E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]

Gene Synonyms

si:ch211-227i14.2

Location

Chromosome 8: 43,668,476-43,721,359 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 6 transcripts (splice variants), 217 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166581.2	ep400-204	9126	3041aa	ENSDARP00000133618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGB8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171633.2	ep400-206	4849	1616aa	ENSDARP00000134655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGN4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000159904.2	ep400-201	3254	1085aa	ENSDARP00000132432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IBU5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000167762.2	ep400-205	775	258aa	ENSDARP00000137420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IMP4	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000163237.2	ep400-203	550	183aa	ENSDARP00000131897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJ56	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000162674.2	ep400-202	286	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

.

Summary

.

.