Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: comp ENSDARG00000098431

.

Description

cartilage oligomeric matrix protein [Source:ZFIN;Acc:ZDB-GENE-060606-1]

Gene Synonyms

Tsp-4b, im:7154332, thbs5, thrombospondin 5, wu:fb78h09

Location

Chromosome 11: 6,941,389-6,974,022 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171255.2	comp-201	6049	749aa	ENSDARP00000130361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KDJ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172851.2	comp-202	2626	749aa	ENSDARP00000142363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KDJ5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172871.2	comp-203	857	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

.

Summary

.

.