Gene: polr1a ENSDARG00000098375

Description

RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]

Gene Synonyms

fa26a03, sb:cb935, wu:fa26a03

Location

GRCz11:CM002898.2

About this gene

This gene has 2 transcripts (splice variants), 212 orthologues, 2 paralogues and is associated with 71 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160973.3	polr1a-202	7583	1693aa	ENSDARP00000130633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9V4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000159352.2	polr1a-201	5286	1684aa	ENSDARP00000136059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPG4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary