Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: si:rp71-19m20.1 ENSDARG00000089828

.

Description

si:rp71-19m20.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3509]

Gene Synonyms

fc43b12, wu:fc43b12

Location

Chromosome 12: 11,352,630-11,371,291 forward strand.

GRCz11:CM002896.2

About this gene

This gene has 4 transcripts (splice variants) and 234 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129495.4	si:rp71-19m20.1-201	2365	364aa	ENSDARP00000112326.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FEM4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185209.1	si:rp71-19m20.1-204	1077	358aa	ENSDARP00000156361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QSK1	-
ENSDART00000148770.2	si:rp71-19m20.1-203	470	128aa	ENSDARP00000124768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2D5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148545.2	si:rp71-19m20.1-202	622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

.

Summary

.

.