Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: tmprss5 ENSDARG00000087717

.

Description

transmembrane serine protease 5 [Source:ZFIN;Acc:ZDB-GENE-131121-184]

Gene Synonyms

si:ch211-247l8.7

Location

Chromosome 15: 18,164,054-18,177,124 reverse strand.

GRCz11:CM002899.2

About this gene

This gene has 3 transcripts (splice variants), 185 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189840.1	tmprss5-203	1749	582aa	ENSDARP00000149114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q7N1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000156505.2	tmprss5-202	2507	551aa	ENSDARP00000127719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WBX7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000155872.2	tmprss5-201	736	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

.

Summary

.

.