Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: mdc1 ENSDARG00000086764

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Description

mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]

Gene Synonyms

im:7163673, sb:eu278, si:ch73-309n4.5

Location

Chromosome 16: 10,329,701-10,345,769 forward strand.

GRCz11:CM002900.2

About this gene

This gene has 2 transcripts (splice variants), 183 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000121966.3	mdc1-201	5745	1914aa	ENSDARP00000106038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FA74	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172845.2	mdc1-202	5527	1786aa	ENSDARP00000142518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGY8	-

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Summary

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