Gene: col6a4a ENSDARG00000079752

Description

collagen, type VI, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-041111-303]

Gene Synonyms

col6a4a, col6a6, im:7152043, si:dkey-202m9.3

Location

GRCz11:CM002900.2

About this gene

This gene has 2 transcripts (splice variants), 258 orthologues, 18 paralogues and is associated with 15 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109703.4	col6a4a-201	8669	2543aa	ENSDARP00000103549.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q924	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000156780.3	col6a4a-202	5445	1756aa	ENSDARP00000128796.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEZ4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary