Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: abca1b ENSDARG00000079009

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Description

ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]

Gene Synonyms

im:7136239, sb:cb407, wu:fa07e06, zgc:171581

Location

Chromosome 14: 6,423,973-6,519,076 forward strand.

GRCz11:CM002898.2

About this gene

This gene has 3 transcripts (splice variants), 232 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149783.3	abca1b-203	1614	142aa	ENSDARP00000124504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8KB58	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000148461.3	abca1b-202	8390	2271aa	ENSDARP00000124570.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2X9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000051556.6	abca1b-201	8271	2282aa	ENSDARP00000051555.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2Y6	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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