Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: atp10d ENSDARG00000078887

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Description

ATPase phospholipid transporting 10D [Source:ZFIN;Acc:ZDB-GENE-090313-231]

Gene Synonyms

si:dkey-20i10.6

Location

Chromosome 13: 12,389,849-12,452,115 forward strand.

GRCz11:CM002897.2

About this gene

This gene has 3 transcripts (splice variants), 224 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000108543.4	atp10d-202	4759	1361aa	ENSDARP00000098971.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JJN8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000086525.6	atp10d-201	5662	1365aa	ENSDARP00000080960.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1REW4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000143557.3	atp10d-203	3685	1228aa	ENSDARP00000115573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8Z8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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