Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cdh16 ENSDARG00000077570

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Description

cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]

Gene Synonyms

zmp:0000001180

Location

Chromosome 7: 44,857,271-44,957,503 reverse strand.

GRCz11:CM002891.2

About this gene

This gene has 3 transcripts (splice variants), 70 orthologues and 49 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165077.3	cdh16-202	5564	819aa	ENSDARP00000135277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4II09	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193378.1	cdh16-203	4935	481aa	ENSDARP00000147827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q909	-
ENSDART00000109534.4	cdh16-201	4829	503aa	ENSDARP00000100794.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FF20	-

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Summary

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