Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: adgrb1a ENSDARG00000075133

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Description

adhesion G protein-coupled receptor B1a [Source:ZFIN;Acc:ZDB-GENE-060607-12]

Gene Synonyms

bai1a, si:ch211-80e15.1, wu:fq36h12, zmp:0000000766

Location

Chromosome 16: 37,470,717-37,630,250 forward strand.

GRCz11:CM002900.2

About this gene

This gene has 5 transcripts (splice variants), 198 orthologues and 112 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000188431.1	adgrb1a-204	8780	1610aa	ENSDARP00000145571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PX08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000192837.1	adgrb1a-205	8705	1585aa	ENSDARP00000144964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PVQ8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000112003.4	adgrb1a-201	8537	1529aa	ENSDARP00000103202.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F9S0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000169331.2	adgrb1a-203	3497	683aa	ENSDARP00000134600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IKP5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000168086.2	adgrb1a-202	1391	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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