Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ino80db ENSDARG00000062226

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Description

INO80 complex subunit Db [Source:NCBI gene;Acc:563304]

Gene Synonyms

zgc:153949

Location

Chromosome 6: 13,207,139-13,254,851 forward strand.

GRCz11:CM002890.2

About this gene

This gene has 3 transcripts (splice variants), 147 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089725.5	ino80db-201	4371	843aa	ENSDARP00000084158.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6M9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000182182.1	ino80db-202	6141	766aa	ENSDARP00000149517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RNT6	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000185601.1	ino80db-203	6036	731aa	ENSDARP00000153548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RDA6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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