Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ccdc186 ENSDARG00000061020

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Description

si:ch211-225b10.4 [Source:ZFIN;Acc:ZDB-GENE-100318-3]

Gene Synonyms

gb:eh562141, si:ch211-225b10.4

Location

Chromosome 12: 30,367,079-30,422,456 forward strand.

GRCz11:CM002896.2

About this gene

This gene has 3 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153364.2	ccdc186-201	4914	955aa	ENSDARP00000127125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2H4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000190112.1	ccdc186-203	7581	912aa	ENSDARP00000146721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q6K4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000153454.2	ccdc186-202	593	158aa	ENSDARP00000127205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAD9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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