Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: srrd ENSDARG00000059028

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Description

SRR1 domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-269]

Gene Synonyms

zgc:153763

Location

Chromosome 8: 4,434,422-4,444,573 forward strand.

GRCz11:CM002892.2

About this gene

This gene has 3 transcripts (splice variants) and 188 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135464.3	srrd-202	1310	274aa	ENSDARP00000115164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S505	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000145184.3	srrd-203	897	228aa	ENSDARP00000119503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S506	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000132540.3	srrd-201	706	172aa	ENSDARP00000122654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S507	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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