Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: zgc:114081 ENSDARG00000057899

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Description

zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]

Location

Chromosome 23: 16,807,209-16,811,727 forward strand.

GRCz11:CM002907.2

About this gene

This gene has 3 transcripts (splice variants), 229 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146992.3	zgc:114081-203	1505	211aa	ENSDARP00000118824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9T0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000080660.5	zgc:114081-201	1467	211aa	ENSDARP00000075106.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9T0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141966.3	zgc:114081-202	829	153aa	ENSDARP00000122291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHE5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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