Gene: epha4a ENSDARG00000054454

Description

eph receptor A4a [Source:NCBI gene;Acc:64271]

Gene Synonyms

EphA4, cb246, ek2, etID309926.2, rtk1, sb:cb246, zek2, zgc:109882

Location

Chromosome 2: 40,067,808-40,136,024 reverse strand.

GRCz11:CM002886.2

About this gene

This gene has 5 transcripts (splice variants), 189 orthologues, 76 paralogues and is associated with 27 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149895.4	epha4a-203	3387	995aa	ENSDARP00000123962.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W481	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000098632.5	epha4a-201	4795	937aa	ENSDARP00000089403.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIM7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000176951.2	epha4a-205	2961	986aa	ENSDARP00000143572.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y8S1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000148563.2	epha4a-202	985	318aa	ENSDARP00000124775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2C8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173665.2	epha4a-204	1693	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Gene: epha4a ENSDARG00000054454

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Gene: epha4a ENSDARG00000054454

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