Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: nup43 ENSDARG00000043884

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Description

nucleoporin 43 [Source:ZFIN;Acc:ZDB-GENE-040426-2533]

Gene Synonyms

zgc:77032

Location

Chromosome 20: 1,316,495-1,327,859 forward strand.

GRCz11:CM002904.2

About this gene

This gene has 3 transcripts (splice variants), 214 orthologues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064439.6	nup43-201	1562	372aa	ENSDARP00000064438.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RFW3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152165.2	nup43-202	664	221aa	ENSDARP00000127090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GF25	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000152586.3	nup43-203	552	184aa	ENSDARP00000127050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GEY6	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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