Gene: rprd1b ENSDARG00000038113

Description

regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]

Gene Synonyms

fb23h08, un-named hi3400, unm hi3400, wu:fb23h08, zgc:55687

Location

GRCz11:CM002907.2

About this gene

This gene has 3 transcripts (splice variants), 220 orthologues, 3 paralogues and is associated with 9 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055564.6	rprd1b-201	1816	335aa	ENSDARP00000055563.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZUK9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185797.1	rprd1b-203	4151	335aa	ENSDARP00000150790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZUK9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134142.2	rprd1b-202	787	225aa	ENSDARP00000123117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QD85	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary