Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: atg13 ENSDARG00000036040

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Description

ATG13 autophagy related 13 homolog (S. cerevisiae) [Source:NCBI gene;Acc:393405]

Gene Synonyms

zgc:63526

Location

Chromosome 7: 38,793,832-38,807,827 reverse strand.

GRCz11:CM002891.2

About this gene

This gene has 4 transcripts (splice variants) and 211 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000052324.6	atg13-201	2463	503aa	ENSDARP00000052323.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SYE0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173669.2	atg13-204	822	274aa	ENSDARP00000142751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSD8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000132772.2	atg13-202	755	186aa	ENSDARP00000120224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QH68	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173462.2	atg13-203	848	91aa	ENSDARP00000142881.1	Nonsense mediated decay	A0A1D5NSR3	-

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Summary

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