Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rps27a ENSDARG00000032725

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Description

ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]

Gene Synonyms

hm:zeh0386, ik:tdsubc_1f2, tdsubc_1f2, xx:tdsubc_1f2, zgc:66168

Location

Chromosome 6: 6,270,686-6,273,519 forward strand.

GRCz11:CM002890.2

About this gene

This gene has 5 transcripts (splice variants), 220 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156859.2	rps27a-204	721	156aa	ENSDARP00000128775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SXA3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000129530.4	rps27a-201	668	156aa	ENSDARP00000107110.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SXA3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154932.2	rps27a-202	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000157035.3	rps27a-205	820	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000156817.3	rps27a-203	684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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