Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cpsf2 ENSDARG00000028971

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Description

cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79]

Gene Synonyms

zgc:92484

Location

Chromosome 20: 50,052,116-50,089,898 forward strand.

GRCz11:CM002904.2

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000188799.1	cpsf2-203	6406	790aa	ENSDARP00000156082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVV4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000047212.6	cpsf2-201	2675	790aa	ENSDARP00000047211.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVV4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137725.2	cpsf2-202	1938	570aa	ENSDARP00000122122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QX42	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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