Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: lsm4 ENSDARG00000023852

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Description

LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]

Gene Synonyms

zgc:73057, zgc:77848

Location

Chromosome 11: 6,859,876-6,868,474 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 2 transcripts (splice variants), 194 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000037824.8	lsm4-201	832	143aa	ENSDARP00000037344.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P6E4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168372.2	lsm4-202	733	129aa	ENSDARP00000135315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IJC4	-

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Summary

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