Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: apoa4b.2 ENSDARG00000020866

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Description

apolipoprotein A-IV b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3143]

Gene Synonyms

fc28d04, wu:fc10a03, wu:fc28d04, zgc:194131

Location

Chromosome 16: 23,947,196-23,948,538 forward strand.

GRCz11:CM002900.2

About this gene

This gene has 5 transcripts (splice variants), 149 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103190.5	apoa4b.2-201	970	255aa	ENSDARP00000093966.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DHC5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142168.2	apoa4b.2-203	1046	255aa	ENSDARP00000114649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DHC5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132961.3	apoa4b.2-202	811	248aa	ENSDARP00000120575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJQ2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147690.3	apoa4b.2-204	588	170aa	ENSDARP00000117270.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCH4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148324.2	apoa4b.2-205	617	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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