Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ythdf1 ENSDARG00000016447

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Description

YTH N(6)-methyladenosine RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2786]

Gene Synonyms

fb49c02, wu:fb49c02, wu:fi19h06, wu:fj87f09, wu:fp06c11, zgc:55657

Location

Chromosome 8: 23,034,718-23,120,252 forward strand.

GRCz11:CM002892.2

About this gene

This gene has 3 transcripts (splice variants), 204 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000025171.9	ythdf1-201	4168	614aa	ENSDARP00000005746.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q802Z0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184512.1	ythdf1-203	2323	614aa	ENSDARP00000153154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q802Z0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145684.2	ythdf1-202	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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