Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: phactr4a ENSDARG00000015552

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Description

phosphatase and actin regulator 4a [Source:NCBI gene;Acc:569383]

Gene Synonyms

zgc:123224

Location

Chromosome 19: 15,142,527-15,229,421 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 5 transcripts (splice variants), 212 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169883.2	phactr4a-205	3036	1011aa	ENSDARP00000136939.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPH0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000055619.9	phactr4a-202	5370	998aa	ENSDARP00000055618.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1K2M1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000151337.3	phactr4a-203	1334	321aa	ENSDARP00000126290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ITL9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000048151.7	phactr4a-201	950	260aa	ENSDARP00000048150.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFA2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151451.2	phactr4a-204	788	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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