Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: st3gal3b ENSDARG00000015252

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Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-050411-13]

Gene Synonyms

SIAT6, im:6892850, st3gal3-r1, st3gal3l

Location

Chromosome 2: 17,266,759-17,393,971 reverse strand.

GRCz11:CM002886.2

About this gene

This gene has 6 transcripts (splice variants), 200 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141188.4	st3gal3b-205	2068	356aa	ENSDARP00000112587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123137.3	st3gal3b-202	1699	356aa	ENSDARP00000110277.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBG1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000100201.5	st3gal3b-201	1446	356aa	ENSDARP00000090974.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBG1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136470.2	st3gal3b-204	926	238aa	ENSDARP00000119998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCX5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134951.3	st3gal3b-203	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000146423.2	st3gal3b-206	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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